For mac instal Happy Clinic9/3/2023 ![]() Gcc -arch ppc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -fno-strict-aliasing -Wno-long-double -no-cpp-precomp -mno-fused-madd -fno-common -dynamic -DNDEBUG -g -O3 -I/Library/Frameworks/amework/Versions/2.5/include/python2.5 -c /Users/salildesai/Desktop/VENV254/CellProfilerVirtualenv/build/Cython/Cython/Plex/Scanners.c -o build/temp.macosx-10.3-i386-2.5/Users/salildesai/Desktop/VENV254/CellProfilerVirtualenv/build/Cython/Cython/Plex/Scanners.oĬc1: error: unrecognized command line option "-Wno-long-double" Warning: no files found matching ‘Cython/Mac/_Filemodule_patched.c’īuilding ‘’ extension Warning: no files found matching ‘Cython/Mac/Makefile’ Warning: no files found matching ‘Demos/Setup.py’ Running setup.py egg_info for package Cython Massachusetts General Hospital | Massachusetts Institute of Technology MGH-MIT ECOR Fellow in Translational Medicine I’m very much looking forward to running/developing with the new CellProfiler! Thanks and any help would be greatly appreciated. Have people had success with installations? ![]() I think adding a little bit more detailed comments to each step would be very helpful. So far I have spent an entire evening on it and don’t seem very close. I’m reasonably good with Mac/Linux but these installation instructions are quite daunting, its not clear whether this should take me a day (or several days to install). How would I do that? I want to make sure I can run CellProfiler before I build the app/executable. Also, it says on the installation page that I can “check out and run CellProfiler in the virtualenv”. I then jumped down to the pip commands and had problems installing Cython, and get the following error (see below). I am trying to install CellProfiler 2.0 on my MacBook, used the makefile to create the virtual environment (from the installation wiki) which seemed to work fine.
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